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git/pack-write.c
Vicent Marti 7cc8f97108 pack-objects: implement bitmap writing
This commit extends more the functionality of `pack-objects` by allowing
it to write out a `.bitmap` index next to any written packs, together
with the `.idx` index that currently gets written.

If bitmap writing is enabled for a given repository (either by calling
`pack-objects` with the `--write-bitmap-index` flag or by having
`pack.writebitmaps` set to `true` in the config) and pack-objects is
writing a packfile that would normally be indexed (i.e. not piping to
stdout), we will attempt to write the corresponding bitmap index for the
packfile.

Bitmap index writing happens after the packfile and its index has been
successfully written to disk (`finish_tmp_packfile`). The process is
performed in several steps:

    1. `bitmap_writer_set_checksum`: this call stores the partial
       checksum for the packfile being written; the checksum will be
       written in the resulting bitmap index to verify its integrity

    2. `bitmap_writer_build_type_index`: this call uses the array of
       `struct object_entry` that has just been sorted when writing out
       the actual packfile index to disk to generate 4 type-index bitmaps
       (one for each object type).

       These bitmaps have their nth bit set if the given object is of
       the bitmap's type. E.g. the nth bit of the Commits bitmap will be
       1 if the nth object in the packfile index is a commit.

       This is a very cheap operation because the bitmap writing code has
       access to the metadata stored in the `struct object_entry` array,
       and hence the real type for each object in the packfile.

    3. `bitmap_writer_reuse_bitmaps`: if there exists an existing bitmap
       index for one of the packfiles we're trying to repack, this call
       will efficiently rebuild the existing bitmaps so they can be
       reused on the new index. All the existing bitmaps will be stored
       in a `reuse` hash table, and the commit selection phase will
       prioritize these when selecting, as they can be written directly
       to the new index without having to perform a revision walk to
       fill the bitmap. This can greatly speed up the repack of a
       repository that already has bitmaps.

    4. `bitmap_writer_select_commits`: if bitmap writing is enabled for
       a given `pack-objects` run, the sequence of commits generated
       during the Counting Objects phase will be stored in an array.

       We then use that array to build up the list of selected commits.
       Writing a bitmap in the index for each object in the repository
       would be cost-prohibitive, so we use a simple heuristic to pick
       the commits that will be indexed with bitmaps.

       The current heuristics are a simplified version of JGit's
       original implementation. We select a higher density of commits
       depending on their age: the 100 most recent commits are always
       selected, after that we pick 1 commit of each 100, and the gap
       increases as the commits grow older. On top of that, we make sure
       that every single branch that has not been merged (all the tips
       that would be required from a clone) gets their own bitmap, and
       when selecting commits between a gap, we tend to prioritize the
       commit with the most parents.

       Do note that there is no right/wrong way to perform commit
       selection; different selection algorithms will result in
       different commits being selected, but there's no such thing as
       "missing a commit". The bitmap walker algorithm implemented in
       `prepare_bitmap_walk` is able to adapt to missing bitmaps by
       performing manual walks that complete the bitmap: the ideal
       selection algorithm, however, would select the commits that are
       more likely to be used as roots for a walk in the future (e.g.
       the tips of each branch, and so on) to ensure a bitmap for them
       is always available.

    5. `bitmap_writer_build`: this is the computationally expensive part
       of bitmap generation. Based on the list of commits that were
       selected in the previous step, we perform several incremental
       walks to generate the bitmap for each commit.

       The walks begin from the oldest commit, and are built up
       incrementally for each branch. E.g. consider this dag where A, B,
       C, D, E, F are the selected commits, and a, b, c, e are a chunk
       of simplified history that will not receive bitmaps.

            A---a---B--b--C--c--D
                     \
                      E--e--F

       We start by building the bitmap for A, using A as the root for a
       revision walk and marking all the objects that are reachable
       until the walk is over. Once this bitmap is stored, we reuse the
       bitmap walker to perform the walk for B, assuming that once we
       reach A again, the walk will be terminated because A has already
       been SEEN on the previous walk.

       This process is repeated for C, and D, but when we try to
       generate the bitmaps for E, we can reuse neither the current walk
       nor the bitmap we have generated so far.

       What we do now is resetting both the walk and clearing the
       bitmap, and performing the walk from scratch using E as the
       origin. This new walk, however, does not need to be completed.
       Once we hit B, we can lookup the bitmap we have already stored
       for that commit and OR it with the existing bitmap we've composed
       so far, allowing us to limit the walk early.

       After all the bitmaps have been generated, another iteration
       through the list of commits is performed to find the best XOR
       offsets for compression before writing them to disk. Because of
       the incremental nature of these bitmaps, XORing one of them with
       its predecesor results in a minimal "bitmap delta" most of the
       time. We can write this delta to the on-disk bitmap index, and
       then re-compose the original bitmaps by XORing them again when
       loaded.

       This is a phase very similar to pack-object's `find_delta` (using
       bitmaps instead of objects, of course), except the heuristics
       have been greatly simplified: we only check the 10 bitmaps before
       any given one to find best compressing one. This gives good
       results in practice, because there is locality in the ordering of
       the objects (and therefore bitmaps) in the packfile.

     6. `bitmap_writer_finish`: the last step in the process is
	serializing to disk all the bitmap data that has been generated
	in the two previous steps.

	The bitmap is written to a tmp file and then moved atomically to
	its final destination, using the same process as
	`pack-write.c:write_idx_file`.

Signed-off-by: Vicent Marti <tanoku@gmail.com>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2013-12-30 12:19:22 -08:00

377 lines
10 KiB
C

#include "cache.h"
#include "pack.h"
#include "csum-file.h"
void reset_pack_idx_option(struct pack_idx_option *opts)
{
memset(opts, 0, sizeof(*opts));
opts->version = 2;
opts->off32_limit = 0x7fffffff;
}
static int sha1_compare(const void *_a, const void *_b)
{
struct pack_idx_entry *a = *(struct pack_idx_entry **)_a;
struct pack_idx_entry *b = *(struct pack_idx_entry **)_b;
return hashcmp(a->sha1, b->sha1);
}
static int cmp_uint32(const void *a_, const void *b_)
{
uint32_t a = *((uint32_t *)a_);
uint32_t b = *((uint32_t *)b_);
return (a < b) ? -1 : (a != b);
}
static int need_large_offset(off_t offset, const struct pack_idx_option *opts)
{
uint32_t ofsval;
if ((offset >> 31) || (opts->off32_limit < offset))
return 1;
if (!opts->anomaly_nr)
return 0;
ofsval = offset;
return !!bsearch(&ofsval, opts->anomaly, opts->anomaly_nr,
sizeof(ofsval), cmp_uint32);
}
/*
* On entry *sha1 contains the pack content SHA1 hash, on exit it is
* the SHA1 hash of sorted object names. The objects array passed in
* will be sorted by SHA1 on exit.
*/
const char *write_idx_file(const char *index_name, struct pack_idx_entry **objects,
int nr_objects, const struct pack_idx_option *opts,
unsigned char *sha1)
{
struct sha1file *f;
struct pack_idx_entry **sorted_by_sha, **list, **last;
off_t last_obj_offset = 0;
uint32_t array[256];
int i, fd;
git_SHA_CTX ctx;
uint32_t index_version;
if (nr_objects) {
sorted_by_sha = objects;
list = sorted_by_sha;
last = sorted_by_sha + nr_objects;
for (i = 0; i < nr_objects; ++i) {
if (objects[i]->offset > last_obj_offset)
last_obj_offset = objects[i]->offset;
}
qsort(sorted_by_sha, nr_objects, sizeof(sorted_by_sha[0]),
sha1_compare);
}
else
sorted_by_sha = list = last = NULL;
if (opts->flags & WRITE_IDX_VERIFY) {
assert(index_name);
f = sha1fd_check(index_name);
} else {
if (!index_name) {
static char tmp_file[PATH_MAX];
fd = odb_mkstemp(tmp_file, sizeof(tmp_file), "pack/tmp_idx_XXXXXX");
index_name = xstrdup(tmp_file);
} else {
unlink(index_name);
fd = open(index_name, O_CREAT|O_EXCL|O_WRONLY, 0600);
}
if (fd < 0)
die_errno("unable to create '%s'", index_name);
f = sha1fd(fd, index_name);
}
/* if last object's offset is >= 2^31 we should use index V2 */
index_version = need_large_offset(last_obj_offset, opts) ? 2 : opts->version;
/* index versions 2 and above need a header */
if (index_version >= 2) {
struct pack_idx_header hdr;
hdr.idx_signature = htonl(PACK_IDX_SIGNATURE);
hdr.idx_version = htonl(index_version);
sha1write(f, &hdr, sizeof(hdr));
}
/*
* Write the first-level table (the list is sorted,
* but we use a 256-entry lookup to be able to avoid
* having to do eight extra binary search iterations).
*/
for (i = 0; i < 256; i++) {
struct pack_idx_entry **next = list;
while (next < last) {
struct pack_idx_entry *obj = *next;
if (obj->sha1[0] != i)
break;
next++;
}
array[i] = htonl(next - sorted_by_sha);
list = next;
}
sha1write(f, array, 256 * 4);
/* compute the SHA1 hash of sorted object names. */
git_SHA1_Init(&ctx);
/*
* Write the actual SHA1 entries..
*/
list = sorted_by_sha;
for (i = 0; i < nr_objects; i++) {
struct pack_idx_entry *obj = *list++;
if (index_version < 2) {
uint32_t offset = htonl(obj->offset);
sha1write(f, &offset, 4);
}
sha1write(f, obj->sha1, 20);
git_SHA1_Update(&ctx, obj->sha1, 20);
if ((opts->flags & WRITE_IDX_STRICT) &&
(i && !hashcmp(list[-2]->sha1, obj->sha1)))
die("The same object %s appears twice in the pack",
sha1_to_hex(obj->sha1));
}
if (index_version >= 2) {
unsigned int nr_large_offset = 0;
/* write the crc32 table */
list = sorted_by_sha;
for (i = 0; i < nr_objects; i++) {
struct pack_idx_entry *obj = *list++;
uint32_t crc32_val = htonl(obj->crc32);
sha1write(f, &crc32_val, 4);
}
/* write the 32-bit offset table */
list = sorted_by_sha;
for (i = 0; i < nr_objects; i++) {
struct pack_idx_entry *obj = *list++;
uint32_t offset;
offset = (need_large_offset(obj->offset, opts)
? (0x80000000 | nr_large_offset++)
: obj->offset);
offset = htonl(offset);
sha1write(f, &offset, 4);
}
/* write the large offset table */
list = sorted_by_sha;
while (nr_large_offset) {
struct pack_idx_entry *obj = *list++;
uint64_t offset = obj->offset;
uint32_t split[2];
if (!need_large_offset(offset, opts))
continue;
split[0] = htonl(offset >> 32);
split[1] = htonl(offset & 0xffffffff);
sha1write(f, split, 8);
nr_large_offset--;
}
}
sha1write(f, sha1, 20);
sha1close(f, NULL, ((opts->flags & WRITE_IDX_VERIFY)
? CSUM_CLOSE : CSUM_FSYNC));
git_SHA1_Final(sha1, &ctx);
return index_name;
}
off_t write_pack_header(struct sha1file *f, uint32_t nr_entries)
{
struct pack_header hdr;
hdr.hdr_signature = htonl(PACK_SIGNATURE);
hdr.hdr_version = htonl(PACK_VERSION);
hdr.hdr_entries = htonl(nr_entries);
if (sha1write(f, &hdr, sizeof(hdr)))
return 0;
return sizeof(hdr);
}
/*
* Update pack header with object_count and compute new SHA1 for pack data
* associated to pack_fd, and write that SHA1 at the end. That new SHA1
* is also returned in new_pack_sha1.
*
* If partial_pack_sha1 is non null, then the SHA1 of the existing pack
* (without the header update) is computed and validated against the
* one provided in partial_pack_sha1. The validation is performed at
* partial_pack_offset bytes in the pack file. The SHA1 of the remaining
* data (i.e. from partial_pack_offset to the end) is then computed and
* returned in partial_pack_sha1.
*
* Note that new_pack_sha1 is updated last, so both new_pack_sha1 and
* partial_pack_sha1 can refer to the same buffer if the caller is not
* interested in the resulting SHA1 of pack data above partial_pack_offset.
*/
void fixup_pack_header_footer(int pack_fd,
unsigned char *new_pack_sha1,
const char *pack_name,
uint32_t object_count,
unsigned char *partial_pack_sha1,
off_t partial_pack_offset)
{
int aligned_sz, buf_sz = 8 * 1024;
git_SHA_CTX old_sha1_ctx, new_sha1_ctx;
struct pack_header hdr;
char *buf;
git_SHA1_Init(&old_sha1_ctx);
git_SHA1_Init(&new_sha1_ctx);
if (lseek(pack_fd, 0, SEEK_SET) != 0)
die_errno("Failed seeking to start of '%s'", pack_name);
if (read_in_full(pack_fd, &hdr, sizeof(hdr)) != sizeof(hdr))
die_errno("Unable to reread header of '%s'", pack_name);
if (lseek(pack_fd, 0, SEEK_SET) != 0)
die_errno("Failed seeking to start of '%s'", pack_name);
git_SHA1_Update(&old_sha1_ctx, &hdr, sizeof(hdr));
hdr.hdr_entries = htonl(object_count);
git_SHA1_Update(&new_sha1_ctx, &hdr, sizeof(hdr));
write_or_die(pack_fd, &hdr, sizeof(hdr));
partial_pack_offset -= sizeof(hdr);
buf = xmalloc(buf_sz);
aligned_sz = buf_sz - sizeof(hdr);
for (;;) {
ssize_t m, n;
m = (partial_pack_sha1 && partial_pack_offset < aligned_sz) ?
partial_pack_offset : aligned_sz;
n = xread(pack_fd, buf, m);
if (!n)
break;
if (n < 0)
die_errno("Failed to checksum '%s'", pack_name);
git_SHA1_Update(&new_sha1_ctx, buf, n);
aligned_sz -= n;
if (!aligned_sz)
aligned_sz = buf_sz;
if (!partial_pack_sha1)
continue;
git_SHA1_Update(&old_sha1_ctx, buf, n);
partial_pack_offset -= n;
if (partial_pack_offset == 0) {
unsigned char sha1[20];
git_SHA1_Final(sha1, &old_sha1_ctx);
if (hashcmp(sha1, partial_pack_sha1) != 0)
die("Unexpected checksum for %s "
"(disk corruption?)", pack_name);
/*
* Now let's compute the SHA1 of the remainder of the
* pack, which also means making partial_pack_offset
* big enough not to matter anymore.
*/
git_SHA1_Init(&old_sha1_ctx);
partial_pack_offset = ~partial_pack_offset;
partial_pack_offset -= MSB(partial_pack_offset, 1);
}
}
free(buf);
if (partial_pack_sha1)
git_SHA1_Final(partial_pack_sha1, &old_sha1_ctx);
git_SHA1_Final(new_pack_sha1, &new_sha1_ctx);
write_or_die(pack_fd, new_pack_sha1, 20);
fsync_or_die(pack_fd, pack_name);
}
char *index_pack_lockfile(int ip_out)
{
char packname[46];
/*
* The first thing we expect from index-pack's output
* is "pack\t%40s\n" or "keep\t%40s\n" (46 bytes) where
* %40s is the newly created pack SHA1 name. In the "keep"
* case, we need it to remove the corresponding .keep file
* later on. If we don't get that then tough luck with it.
*/
if (read_in_full(ip_out, packname, 46) == 46 && packname[45] == '\n' &&
memcmp(packname, "keep\t", 5) == 0) {
char path[PATH_MAX];
packname[45] = 0;
snprintf(path, sizeof(path), "%s/pack/pack-%s.keep",
get_object_directory(), packname + 5);
return xstrdup(path);
}
return NULL;
}
/*
* The per-object header is a pretty dense thing, which is
* - first byte: low four bits are "size", then three bits of "type",
* and the high bit is "size continues".
* - each byte afterwards: low seven bits are size continuation,
* with the high bit being "size continues"
*/
int encode_in_pack_object_header(enum object_type type, uintmax_t size, unsigned char *hdr)
{
int n = 1;
unsigned char c;
if (type < OBJ_COMMIT || type > OBJ_REF_DELTA)
die("bad type %d", type);
c = (type << 4) | (size & 15);
size >>= 4;
while (size) {
*hdr++ = c | 0x80;
c = size & 0x7f;
size >>= 7;
n++;
}
*hdr = c;
return n;
}
struct sha1file *create_tmp_packfile(char **pack_tmp_name)
{
char tmpname[PATH_MAX];
int fd;
fd = odb_mkstemp(tmpname, sizeof(tmpname), "pack/tmp_pack_XXXXXX");
*pack_tmp_name = xstrdup(tmpname);
return sha1fd(fd, *pack_tmp_name);
}
void finish_tmp_packfile(char *name_buffer,
const char *pack_tmp_name,
struct pack_idx_entry **written_list,
uint32_t nr_written,
struct pack_idx_option *pack_idx_opts,
unsigned char sha1[])
{
const char *idx_tmp_name;
char *end_of_name_prefix = strrchr(name_buffer, 0);
if (adjust_shared_perm(pack_tmp_name))
die_errno("unable to make temporary pack file readable");
idx_tmp_name = write_idx_file(NULL, written_list, nr_written,
pack_idx_opts, sha1);
if (adjust_shared_perm(idx_tmp_name))
die_errno("unable to make temporary index file readable");
sprintf(end_of_name_prefix, "%s.pack", sha1_to_hex(sha1));
free_pack_by_name(name_buffer);
if (rename(pack_tmp_name, name_buffer))
die_errno("unable to rename temporary pack file");
sprintf(end_of_name_prefix, "%s.idx", sha1_to_hex(sha1));
if (rename(idx_tmp_name, name_buffer))
die_errno("unable to rename temporary index file");
*end_of_name_prefix = '\0';
free((void *)idx_tmp_name);
}